Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798467.1_cds_XP_016460493.1_5360
CDS Infomation

[gene=LOC107783974] [db_xref=GeneID:107783974] [protein=la protein 1-like] [protein_id=XP_016460493.1] [location=join(7496..7543,7630..7708,8367..8516,8673..8815,9204..9352,10363..10464,10564..10963,11737..11884,12300..12381,12932..13025)] [gbkey=CDS]
Sequence

ATGGCCAAAACTTTGAACGAAGAAACAATCAAGAAGGTCATTCGACAGGTTGAGTTTTAC
TTCAGTGATAGTAATCTTCCAAAAGATGGGTTTCTTAAGAAAACTGTTGATGAAAGTGAA
GATGGGTTGGTAAGTTTGGCTTTGATATGTTCGTTTTCACGGATGAGGTATCATTTGGGT
TTGGGAGCTTCAAAGCAGGAAGAGATATCAGATGATACTATACAAGCTGTTGCTGAAGCT
TTAAAGGCTTCTTCTTTTCTTAAGATTTCGGAAGATGGGAAACGTGTTGGTAGAGTGACA
GAGCTTTCGAAGCCTGAGGAGGTTATAGAGCAAATAGATGTCAGGACAATTGCTGCATCC
CCATTGGAATACAGTGTCAAGCTTGAAGATGTGGAGTCCTTCTTTGGTCAGCATGGCAAG
GTTAACAGTGTGAGACTGCCTCGTCATGTAGCTGACAAAAGGATGTTTTGTGGCACTGCT
CTGGTTGAGTTCGCCAGTGAGGAAGATGCGGCTAATGTTGTGAAGCAAAACTTGGTTTAT
GAAGGAGTCGAATTAGAACTGAAACCAAAGAAAGATTTCGATGTAGAAAGAGCCAATGAA
GAGAAAGAAGTTGAGCATAACCGTCCTCATCTTGGTCCAAATAGTAAAAATAATGCGAAG
CCTGAACCAGACTATCCTAAGGGCTTGATCATTGCATTTAAGTTGAAGAGAAAAAGCTCT
ACAGAACAAAATGGTAATCATCAAGCGGCAGCTGAAAGCGCAAGTGCTCCCGAAACAGAA
GGCAATAAAGAAACAACAAAAGACAATGTTAAAGTGACAGAAGAGAAGGTGCCCGAAGAT
AAAGATGAAGACAATAATGAGAAGGGTGATGAAAAAGATGTAGAGAATGGAAGTGGGGAG
ACTGATGTTCAGAATCCTGAAGCTATAGAGAAATCCGTGGAAAGTCCAACTGAAGAGGAT
GATCAAGCTCCTGCTGAAGAAAAATTATCAATTGCTGCTTGCAAAGACAACAAGGACGTT
GTTATGCGTGAAGACTTAAAGAGCGTTTTCCAAAAATTTGGCACTGTGAAGTTTGTTGAT
TTCACGATTGGATCAGAATCAGGTTATATAAGGTTTGAAAATGAAGGGGCTGCACAGAAA
GCACGTGCTGCTGGTGTACTTGCTGAAGAAGGTGGTCTGACGGTGAAAAATTTCATTGCT
GCCTTAGACCCAGTAACTGGTGATGCTGAGAAGGAATACTGGAGTATGTTCCGTAATAAC
CAGGACAAACGCCGCGACTTTAATAAAGGGAATAGGGGAAGGGGAGGAAGGCACAACAGA
GGTGGGAAGCATTCGCGCCCAAGGGGAAACGATTCAGGTGGTCGTCCAAACAAATTCCAG
AAAGTTAGGACATGA

Peptide Sequence

PEP ID

XP_016460493.1
PEP Infomation

PREDICTED: la protein 1-like [Nicotiana tabacum]
Sequence

MAKTLNEETIKKVIRQVEFYFSDSNLPKDGFLKKTVDESEDGLVSLALICSFSRMRYHLG
LGASKQEEISDDTIQAVAEALKASSFLKISEDGKRVGRVTELSKPEEVIEQIDVRTIAAS
PLEYSVKLEDVESFFGQHGKVNSVRLPRHVADKRMFCGTALVEFASEEDAANVVKQNLVY
EGVELELKPKKDFDVERANEEKEVEHNRPHLGPNSKNNAKPEPDYPKGLIIAFKLKRKSS
TEQNGNHQAAAESASAPETEGNKETTKDNVKVTEEKVPEDKDEDNNEKGDEKDVENGSGE
TDVQNPEAIEKSVESPTEEDDQAPAEEKLSIAACKDNKDVVMREDLKSVFQKFGTVKFVD
FTIGSESGYIRFENEGAAQKARAAGVLAEEGGLTVKNFIAALDPVTGDAEKEYWSMFRNN
QDKRRDFNKGNRGRGGRHNRGGKHSRPRGNDSGGRPNKFQKVRT

Transcript Sequence

Gene sequence data has not been registered.